About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29421-
Paelopatides29422EPM2A-INTERACTING PROTEIN 1
Paelopatides29423REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29424WD-REPEAT PROTEIN-RELATED
Paelopatides29425-
Paelopatides29426REVERSE TRANSCRIPTASES
Paelopatides29427TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides29428WD-REPEAT PROTEIN-RELATED
Paelopatides29429-
Paelopatides29430-
Paelopatides29431GOLGI MEMBRANE PROTEIN YIP1
Paelopatides2943260S/50S RIBOSOMAL PROTEIN L6/L9
Paelopatides29433GOLGI MEMBRANE PROTEIN YIP1
Paelopatides29434PROTEIN CBG26694
Paelopatides29435PROTEIN CBG26694
Paelopatides29436UNCHARACTERIZED
Paelopatides29437-
Paelopatides29438-
Paelopatides29439PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29440ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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