About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29522REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29523-
Paelopatides29524SERINE/THREONINE-PROTEIN KINASE TAO
Paelopatides29525-
Paelopatides29526CELL DIVISION PROTEIN KINASE
Paelopatides29527PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides29528-
Paelopatides29529DNA HELICASE RECQ FAMILY MEMBER
Paelopatides29530GTP-BINDING
Paelopatides29531-
Paelopatides29532PROTEIN CBG26694
Paelopatides29533CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides29534HERMANSKY-PUDLAK SYNDROME PROTEIN 1
Paelopatides29535YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides29536YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides29539RETROTRANSPOSON
Paelopatides29540RETROTRANSPOSON
Paelopatides29541-
Paelopatides29542UNCHARACTERIZED
Paelopatides29543-
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