About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30253-
Paelopatides30254TYROSINE-PROTEIN KINASE HOPSCOTCH
Paelopatides30255-
Paelopatides30256UNCHARACTERIZED
Paelopatides30257CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30258POL PROTEIN
Paelopatides30259ENDONUCLEASE-RELATED
Paelopatides30260-
Paelopatides30261-
Paelopatides30262-
Paelopatides30263NETRIN RECEPTOR UNC5
Paelopatides30264-
Paelopatides30265POL PROTEIN
Paelopatides30266ENDONUCLEASE-RELATED
Paelopatides30267-
Paelopatides30268ZINC FINGER CONTAINING PROTEIN
Paelopatides30269PROTEIN CBG26694
Paelopatides30270PROTEIN CBG26694
Paelopatides30271-
Paelopatides30272RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
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