About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30130RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides30131FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30132-
Paelopatides30133-
Paelopatides30134-
Paelopatides30135ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30136-
Paelopatides30137EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
Paelopatides30138ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides30139FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30140SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides30141SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides30142-
Paelopatides30143-
Paelopatides30144XAA-PRO AMINOPEPTIDASE 1
Paelopatides30145-
Paelopatides30146-
Paelopatides30147PROTEIN CBG26694
Paelopatides30148ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30149CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
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