About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30170ENZYMATIC POLYPROTEIN-RELATED
Paelopatides30171-
Paelopatides30172UNCHARACTERIZED
Paelopatides30173-
Paelopatides30174GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides30175BUCENTAUR RELATED
Paelopatides30176NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides30177-
Paelopatides30178HUNTINGTON DISEASE PROTEIN
Paelopatides30179REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30180ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30181UNCHARACTERIZED
Paelopatides30182-
Paelopatides30183-
Paelopatides30185PROTEIN CBG26694
Paelopatides30186PARANEOPLASTIC ANTIGEN
Paelopatides30187-
Paelopatides30188EPM2A-INTERACTING PROTEIN 1
Paelopatides30189EPM2A-INTERACTING PROTEIN 1
Paelopatides30190EPM2A-INTERACTING PROTEIN 1
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