About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30334-
Paelopatides30335-
Paelopatides30336REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30337BUD13 HOMOLOG
Paelopatides30338UBIQUITIN
Paelopatides30339XPA-BINDING PROTEIN 1-RELATED
Paelopatides3034215-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides30343-
Paelopatides30344-
Paelopatides30345FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30346FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30347ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30348DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides30349DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides30350CAMK FAMILY PROTEIN KINASE
Paelopatides30351BUCENTAUR RELATED
Paelopatides30352-
Paelopatides30353-
Paelopatides30354-
Paelopatides30355-
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