About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30400BONUS, ISOFORM C-RELATED
Paelopatides30401REVERSE TRANSCRIPTASES
Paelopatides30402ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30403-
Paelopatides30404RETROTRANSPOSON GAG-LIKE PROTEIN 9
Paelopatides30405-
Paelopatides30406IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides30407AGAP000124-PA
Paelopatides30408ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30409REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30410HSDA/SDA1-RELATED
Paelopatides30411HSDA/SDA1-RELATED
Paelopatides30412FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30413ALPHA-TECTORIN-RELATED
Paelopatides30415FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30416FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30417-
Paelopatides30418EPM2A-INTERACTING PROTEIN 1
Paelopatides30419ALDO/KETO REDUCTASE
Paelopatides30420-
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