About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30356ARRESTIN DOMAIN CONTAINING PROTEIN
Paelopatides30357-
Paelopatides30358TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides30359ENDONUCLEASE-RELATED
Paelopatides30360ENZYMATIC POLYPROTEIN-RELATED
Paelopatides30361PROTEIN CBG26694
Paelopatides30362ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30363-
Paelopatides30364ACETYLCHOLINESTERASE
Paelopatides30365EPM2A-INTERACTING PROTEIN 1
Paelopatides30366EPM2A-INTERACTING PROTEIN 1
Paelopatides30367-
Paelopatides30369SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides30370TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides30371IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides30372IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides30373-
Paelopatides30374-
Paelopatides30375EPM2A-INTERACTING PROTEIN 1
Paelopatides30376-
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