About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30421NETRIN RECEPTOR UNC5
Paelopatides30422REVERSE TRANSCRIPTASE
Paelopatides30423OLIGOPEPTIDE TRANSPORTER-RELATED
Paelopatides30424-
Paelopatides30425UPF0147 PROTEIN MJ1419
Paelopatides30426CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30427BUCENTAUR RELATED
Paelopatides30428-
Paelopatides30429-
Paelopatides30433POL PROTEIN
Paelopatides30434-
Paelopatides30435-
Paelopatides30436-
Paelopatides30438TYROSINE-PROTEIN KINASE
Paelopatides30439-
Paelopatides30442-
Paelopatides30443UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER
Paelopatides30444-
Paelopatides30445PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30446COILED-COIL DOMAIN-CONTAINING PROTEIN 127
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