About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30487-
Paelopatides30488-
Paelopatides304895-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides304905-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides30493PROTEIN CBG26694
Paelopatides30494-
Paelopatides30495HILLARIN
Paelopatides30496HILLARIN
Paelopatides30497SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30498FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30499FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30500INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides30501-
Paelopatides30502MATRIX PROTEIN, PUTATIVE-RELATED
Paelopatides30503TRANSPOSABLE ELEMENT-RELATED
Paelopatides30504ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides30505OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL
Paelopatides30506-
Paelopatides30507SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
Paelopatides30508PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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