About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides3057152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides30572ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides30573-
Paelopatides30574-
Paelopatides30575PROTEIN CBG26694
Paelopatides30576CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30577CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30578L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides30579TUBULIN POLYGLUTAMYLASE
Paelopatides30580-
Paelopatides30581ZINC FINGER PROTEIN 142
Paelopatides30582-
Paelopatides30583METALLOPROTEASE TLDD
Paelopatides30584-
Paelopatides30585PROTEIN CBG26694
Paelopatides30586PROTEIN CBG26694
Paelopatides30587NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides30588-
Paelopatides30589SI:CH211-262H13.3-RELATED-RELATED
Paelopatides30590-
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