About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32714WNT RELATED
Paelopatides32715NY-REN-58 ANTIGEN
Paelopatides32716SODIUM-BILE ACID COTRANSPORTER
Paelopatides32717HISTIDINE TRIAD HIT PROTEIN MEMBER
Paelopatides32718ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10
Paelopatides32719TANDEM PH DOMAIN CONTAINING PROTEIN
Paelopatides32720-
Paelopatides32721SODIUM/CALCIUM EXCHANGER
Paelopatides32722-
Paelopatides32723-
Paelopatides32724TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides32725-
Paelopatides32726ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32727POL PROTEIN
Paelopatides32728DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides32729-
Paelopatides32730-
Paelopatides32731-
Paelopatides32732-
Paelopatides32733E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
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