About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32628-
Paelopatides32629-
Paelopatides32630RP42 RELATED
Paelopatides32631REVERSE TRANSCRIPTASES
Paelopatides32632OLFACTOMEDIN-RELATED
Paelopatides32633OLFACTOMEDIN-RELATED
Paelopatides32636SI:CH211-196P9.1-RELATED
Paelopatides32637-
Paelopatides32638DNA HELICASE RECQ FAMILY MEMBER
Paelopatides32639-
Paelopatides32640-
Paelopatides32641NAD DEPENDENT EPIMERASE/DEHYDRATASE
Paelopatides32642NAD DEPENDENT EPIMERASE/DEHYDRATASE
Paelopatides32643NAD DEPENDENT EPIMERASE/DEHYDRATASE
Paelopatides32644UNCHARACTERIZED
Paelopatides32645PROTEIN CBG26694
Paelopatides32646UNCHARACTERIZED
Paelopatides32647NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides32648FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides32649VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
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