About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32608AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28
Paelopatides32609-
Paelopatides32610-
Paelopatides32611-
Paelopatides32612-
Paelopatides32613-
Paelopatides32614CRUMBS FAMILY MEMBER
Paelopatides32615ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32616CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 157
Paelopatides32617REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32618DNA HELICASE RECQ FAMILY MEMBER
Paelopatides32619NADH-CYTOCHROME B5 REDUCTASE
Paelopatides32620-
Paelopatides32621-
Paelopatides32622-
Paelopatides32623EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides32624RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides32625RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides32626RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides32627TELOMERASE REVERSE TRANSCRIPTASE
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