About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32754-
Paelopatides32755SELENOPROTEIN O
Paelopatides32756-
Paelopatides32757G DOMAIN-CONTAINING PROTEIN
Paelopatides32758VACUOLAR PROTEIN 8
Paelopatides32759CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides32760PROTEIN CBG05131
Paelopatides32761-
Paelopatides32762-
Paelopatides32763CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32764FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32765-
Paelopatides32766ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides32767ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides32768LD08641P
Paelopatides32769MOLTING PROTEIN MLT-4
Paelopatides32770-
Paelopatides32771TETRASPANIN
Paelopatides32772ARYLSULFATASE
Paelopatides32773-
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