About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35991PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides35992BASIGIN RELATED
Paelopatides35993-
Paelopatides35994CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides35995-
Paelopatides35996EXPRESSED PROTEIN
Paelopatides35997FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35998SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35999ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36000REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36001TRANSMEMBRANE PROTEIN 136
Paelopatides36002-
Paelopatides36003PROTEIN SEL-1 HOMOLOG 3
Paelopatides36004PROTEIN SEL-1 HOMOLOG 3
Paelopatides36005-
Paelopatides36007-
Paelopatides36008ZGC:195170
Paelopatides36009ENDONUCLEASE-RELATED
Paelopatides36010POL PROTEIN
Paelopatides36011ENDONUCLEASE-RELATED
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