About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35970REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35971-
Paelopatides35972ANKYRIN REPEAT CONTAINING
Paelopatides35974HL01030P-RELATED
Paelopatides35975HL01030P-RELATED
Paelopatides35976-
Paelopatides35977FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35978-
Paelopatides35979TRANSPOSABLE ELEMENT-RELATED
Paelopatides35980BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides35981CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35982CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35983ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides35984UNCHARACTERIZED
Paelopatides35985RAS GTPASE-RELATED
Paelopatides35986HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Paelopatides35987-
Paelopatides35988-
Paelopatides35989TRANSMEMBRANE PROTEIN
Paelopatides35990-
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