About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39700-
Paelopatides39701VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37
Paelopatides39702FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides39705FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides39706CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides39707BONUS, ISOFORM C-RELATED
Paelopatides39708BONUS, ISOFORM C-RELATED
Paelopatides39709BONUS, ISOFORM C-RELATED
Paelopatides39710BNAA05G37250D PROTEIN
Paelopatides39711HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides39712HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides39713TRANSCRIPTIONAL REPRESSOR P66-RELATED
Paelopatides39714UNCHARACTERIZED
Paelopatides39715-
Paelopatides39716MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER
Paelopatides39717ACID CLUSTER PROTEIN 33
Paelopatides39718ACID CLUSTER PROTEIN 33
Paelopatides39719ARYLSULFATASE
Paelopatides39720APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides39721-
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