About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39763MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Paelopatides39764PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides39765BAT4 PROTEIN-RELATED
Paelopatides39766RAD52 MOTIF-CONTAINING PROTEIN 1
Paelopatides39767SI:CH211-196P9.1-RELATED
Paelopatides39768GEO11136P1-RELATED
Paelopatides39769PROTEIN CBG26694
Paelopatides39770REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39771REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39772NUCLEAR HORMONE RECEPTOR
Paelopatides39773STEP II SPLICING FACTOR SLU7
Paelopatides39774-
Paelopatides39775RING FINGER AND SRY DOMAIN-CONTAINING
Paelopatides39776-
Paelopatides39778METHYL-CPG BINDING PROTEIN, DROSOPHILA
Paelopatides39779-
Paelopatides39780SCC1 / RAD21 FAMILY MEMBER
Paelopatides39781TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Paelopatides39782JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN
Paelopatides39783-
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