About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39660-
Paelopatides39661CLASPIN
Paelopatides39662PEPTIDASE
Paelopatides39663-
Paelopatides39664SODIUM/CALCIUM EXCHANGER
Paelopatides39665CLASPIN
Paelopatides39666-
Paelopatides39667MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39668MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39669-
Paelopatides39670-
Paelopatides39671-
Paelopatides39672SODIUM/CALCIUM EXCHANGER
Paelopatides39673LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Paelopatides39674MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides39675PROTEIN CBG26694
Paelopatides39676-
Paelopatides39677-
Paelopatides39678PROTEIN CBG26694
Paelopatides39679-
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