About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39805ZGC:195170
Paelopatides39806PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides39807ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides39808GLYCOSYLTRANSFERASE-RELATED
Paelopatides39809CHARGED MULTIVESICULAR BODY PROTEIN
Paelopatides39810CHARGED MULTIVESICULAR BODY PROTEIN
Paelopatides39811-
Paelopatides39812FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24
Paelopatides39813DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1
Paelopatides39814PROTEIN CBG26694
Paelopatides39815PROTEIN CBG26694
Paelopatides39816LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides39817LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides39818-
Paelopatides39820-
Paelopatides39821OVOCHYMASE-RELATED
Paelopatides39823LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Paelopatides39824SEPTIN
Paelopatides39825BOLA-LIKE PROTEIN-RELATED
Paelopatides39826-
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