About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39784-
Paelopatides39785C10ORF188 FAMILY MEMBER
Paelopatides39786-
Paelopatides39787DYNEIN INTERMEDIATE CHAIN
Paelopatides39788MYOTUBULARIN-RELATED
Paelopatides39789ANKYRIN DOMAIN-CONTAINING
Paelopatides39790ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides39791-
Paelopatides39792NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Paelopatides39793PROTEIN CBG26694
Paelopatides39794REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39795NG5
Paelopatides39796-
Paelopatides39797-
Paelopatides39799-
Paelopatides39800ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides39801-
Paelopatides39802FI04643P-RELATED
Paelopatides39803-
Paelopatides39804-
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