About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides39847-
Paelopatides39848-
Paelopatides39849-
Paelopatides39850UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Paelopatides39851POL PROTEIN
Paelopatides39852-
Paelopatides39853-
Paelopatides39854SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
Paelopatides39855GABA-B RECEPTOR
Paelopatides39856PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides39857REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides39858LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides39859PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides39860-
Paelopatides39861-
Paelopatides39862-
Paelopatides39863BTB DOMAIN-CONTAINING PROTEIN
Paelopatides39864-
Paelopatides39865-
Paelopatides39866REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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