About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40880EPM2A-INTERACTING PROTEIN 1
Paelopatides40881IST1 FAMILY MEMBER
Paelopatides40882-
Paelopatides40883PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides40884CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides40885-
Paelopatides40886-
Paelopatides40887UNCHARACTERIZED
Paelopatides40888AP-5 COMPLEX SUBUNIT MU-1
Paelopatides40889-
Paelopatides40890PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides40891SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides40892-
Paelopatides40893-
Paelopatides40894SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides40895-
Paelopatides40896-
Paelopatides40897-
Paelopatides40898-
Paelopatides40899PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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