About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41022HISTONE ACETYLTRANSFERASE COMPLEX
Paelopatides41023SULFOTRANSFERASE SULT
Paelopatides41024GOLGIN- RELATED
Paelopatides41025ANION EXCHANGE PROTEIN
Paelopatides41026-
Paelopatides41027-
Paelopatides41028AP-5 COMPLEX SUBUNIT BETA-1
Paelopatides41029ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides41030ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides41031PROTEIN CBG26694
Paelopatides41032TUMOR SUPPRESSOR CANDIDATE 2
Paelopatides41033-
Paelopatides41034PROTEIN CBG26694
Paelopatides41035PROTEIN CBG26694
Paelopatides41036ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Paelopatides41037-
Paelopatides41038ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides41039ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides41040-
Paelopatides41041-
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