About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40982CYTOSOLIC CARBOXYPEPTIDASE
Paelopatides40983-
Paelopatides40984-
Paelopatides40985L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides40986CYTOCHROME C OXIDASE SUBUNIT VIIC
Paelopatides40987-
Paelopatides40988PROTEIN CBG26694
Paelopatides40989-
Paelopatides40990-
Paelopatides40991TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides40992CADHERIN-87A
Paelopatides40993PROTEIN CBG26694
Paelopatides40994PROTEIN CBG26694
Paelopatides40995PROTEIN CBG26694
Paelopatides40996-
Paelopatides40997POL PROTEIN
Paelopatides40998PROTEIN CBG26694
Paelopatides40999-
Paelopatides41000REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41001IG-LIKE DOMAIN-CONTAINING PROTEIN
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