About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40900FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40901MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
Paelopatides40902MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
Paelopatides40903MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
Paelopatides40904MINA53 MYC INDUCED NUCLEAR ANTIGEN
Paelopatides40905MINA53 MYC INDUCED NUCLEAR ANTIGEN
Paelopatides40906FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40907CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides40908MATING RESPONSE PROTEIN POI2
Paelopatides40909FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides40910-
Paelopatides40911SEROLOGICALLY DEFINED COLON CANCER ANTIGEN 8
Paelopatides40912TETRATRICOPEPTIDE-LIKE HELICAL
Paelopatides40913-
Paelopatides40914-
Paelopatides40915PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides40916PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides40917POL PROTEIN
Paelopatides40918ENDONUCLEASE-RELATED
Paelopatides40919SOLUTE CARRIER FAMILY 22 MEMBER
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