About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides40940-
Paelopatides40941-
Paelopatides40942JUNCTIONAL ADHESION MOLECULE B
Paelopatides40943PHOSPHOLIPID SCRAMBLASE-RELATED
Paelopatides40944AGAP005574-PA
Paelopatides40945-
Paelopatides40946-
Paelopatides40947POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides40948-
Paelopatides40949GABA-B RECEPTOR
Paelopatides40950-
Paelopatides40951ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides40952CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides40953MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49
Paelopatides40954SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides40955-
Paelopatides40956FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides40957-
Paelopatides40958-
Paelopatides40959-
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