About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41596EPM2A-INTERACTING PROTEIN 1
Paelopatides41597F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Paelopatides41598CONTACTIN 5
Paelopatides41599PROTEIN CBG11839-RELATED
Paelopatides41600-
Paelopatides41601PROTEIN CBG11839-RELATED
Paelopatides41602TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides41603ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides41604ENZYMATIC POLYPROTEIN-RELATED
Paelopatides41607-
Paelopatides41608UNCHARACTERIZED DUF1308
Paelopatides41609-
Paelopatides41610-
Paelopatides41611REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41612REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41615FI04643P-RELATED
Paelopatides41616CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41617SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides41618T-BOX PROTEIN-RELATED
Paelopatides41619CXC DOMAIN-CONTAINING PROTEIN-RELATED
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