About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41553PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
Paelopatides41554L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides41555PEROXISOMAL BIOGENESIS FACTOR 3
Paelopatides41556-
Paelopatides41557-
Paelopatides41558SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides41559PROTEIN CBG26694
Paelopatides41560SERINE/THREONINE-PROTEIN KINASE
Paelopatides41562-
Paelopatides41563TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides41564PROTEIN CBG26694
Paelopatides41565-
Paelopatides41566DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
Paelopatides41567DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
Paelopatides41568IMMUNOGLOBULIN
Paelopatides41569-
Paelopatides41570ZINC FINGER PROTEIN
Paelopatides41571-
Paelopatides41572ZINC FINGER AND SCAN DOMAIN-CONTAINING
Paelopatides41573-
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