About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41491SKELETOR-RELATED
Paelopatides41492SKELETOR-RELATED
Paelopatides41493SKELETOR-RELATED
Paelopatides41495NEUROPEPTIDES RECEPTOR
Paelopatides41496WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1
Paelopatides41497KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides41498-
Paelopatides41499PROTEIN MIS12 HOMOLOG
Paelopatides41500-
Paelopatides41501OS05G0310600 PROTEIN
Paelopatides41502ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41503-
Paelopatides41504-
Paelopatides41505PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides41506-
Paelopatides41507-
Paelopatides41508PEROXISOMAL BIOGENESIS FACTOR 11
Paelopatides41509HYDROLASE
Paelopatides41510ALPHA-AMYLASE
Paelopatides41511RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
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