About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41512CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41513-
Paelopatides41514SULFOTRANSFERASE SULT
Paelopatides41515-
Paelopatides41516SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides41517-
Paelopatides41518-
Paelopatides41519-
Paelopatides41520SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides41521PROTEIN, PUTATIVE-RELATED
Paelopatides41522ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides41523SULFOTRANSFERASE SULT
Paelopatides41524SULFOTRANSFERASE SULT
Paelopatides41525-
Paelopatides41526ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides41527ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides41528SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides41529-
Paelopatides41530PDZ DOMAIN-CONTAINING PROTEIN 8
Paelopatides41531-
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