About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42900-
Paelopatides42901-
Paelopatides42902DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides42903-
Paelopatides42904-
Paelopatides42905-
Paelopatides42906PROTEIN, PUTATIVE-RELATED
Paelopatides42907-
Paelopatides42908-
Paelopatides42909AMINE OXIDASE
Paelopatides429103-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
Paelopatides42911G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides42912-
Paelopatides42914ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Paelopatides42915CRUMBS FAMILY MEMBER
Paelopatides42916S-FORMYLGLUTATHIONE HYDROLASE
Paelopatides42917WD40 REPEAT PROTEIN
Paelopatides42918UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
Paelopatides42919-
Paelopatides42920ACYL-MALONYL CONDENSING ENZYME-RELATED
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