About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42921REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42922-
Paelopatides42923PARAOXONASE
Paelopatides42924PARAOXONASE
Paelopatides42925TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides42926PARAOXONASE
Paelopatides42927TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides42928PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides42929-
Paelopatides42930TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides42931-
Paelopatides42932-
Paelopatides42933RETROTRANSPOSON
Paelopatides42934PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides42935PROTEIN CBG26694
Paelopatides42936REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42937-
Paelopatides42938PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides42939REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42940EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
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