About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43339REVERSE TRANSCRIPTASES
Paelopatides43340REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43341REVERSE TRANSCRIPTASES
Paelopatides43342REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43343REVERSE TRANSCRIPTASES
Paelopatides43344REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43345PROTEIN CBG26694
Paelopatides43346PROTEIN, PUTATIVE-RELATED
Paelopatides43347-
Paelopatides43348-
Paelopatides43349OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED
Paelopatides43350-
Paelopatides43351UNCHARACTERIZED
Paelopatides43352-
Paelopatides43353CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Paelopatides43354-
Paelopatides43355-
Paelopatides43356-
Paelopatides43357BONUS, ISOFORM C-RELATED
Paelopatides43358-
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