About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45734B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides45735PEPTIDYLPROLYL ISOMERASE
Paelopatides45736PEPTIDYLPROLYL ISOMERASE
Paelopatides45737ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
Paelopatides45738PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45739TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
Paelopatides45740-
Paelopatides45741-
Paelopatides45742TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
Paelopatides45743RAN BINDING PROTEIN
Paelopatides45744-
Paelopatides45745KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
Paelopatides45746LD33804P
Paelopatides45747KELCH PROTEIN
Paelopatides45748-
Paelopatides45749FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45750FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45751POL PROTEIN
Paelopatides45752PARANEOPLASTIC ANTIGEN
Paelopatides45753-
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