About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45694REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45695-
Paelopatides45696-
Paelopatides45697-
Paelopatides45698-
Paelopatides45699E3 UBIQUITIN-PROTEIN LIGASE TTC3
Paelopatides45700TRANSMEMBRANE PROTEIN 79
Paelopatides45701TETRATRICOPEPTIDE REPEAT PROTEIN 14
Paelopatides45702NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED
Paelopatides45703NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED
Paelopatides45704FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45705FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45706-
Paelopatides45707ADHESION G-PROTEIN COUPLED RECEPTOR
Paelopatides45708F14O23.11 PROTEIN
Paelopatides45709UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides45710OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides45711BUCENTAUR RELATED
Paelopatides45712REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45713NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
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