About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45774ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45775CENTROSOMAL PROTEIN 2
Paelopatides45776PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides45777-
Paelopatides45778-
Paelopatides45779-
Paelopatides45780-
Paelopatides45781TRAF-TYPE ZINC FINGER PROTEIN-RELATED
Paelopatides45782TRAF-TYPE ZINC FINGER PROTEIN-RELATED
Paelopatides45783MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
Paelopatides45784BUCENTAUR RELATED
Paelopatides45785G-PROTEIN COUPLED RECEPTOR 143
Paelopatides45786REVERSE TRANSCRIPTASES
Paelopatides45787-
Paelopatides45788G-PROTEIN COUPLED RECEPTOR 143
Paelopatides45789-
Paelopatides45790REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45791PROTEIN CBG26694
Paelopatides45792PROTEIN CBG26694
Paelopatides45793PROTEIN CBG26694
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