About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45604METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides45605ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45606PROTEIN CBG26694
Paelopatides45609REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45610-
Paelopatides45611ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45612-
Paelopatides45613CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45614-
Paelopatides45615ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45616-
Paelopatides45617SARM1
Paelopatides45618RAS-RELATED PROTEIN RAB
Paelopatides45619CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1
Paelopatides45620PHD/F-BOX CONTAINING PROTEIN
Paelopatides45621MORN REPEAT-CONTAINING PROTEIN 3
Paelopatides45622T COMPLEX PROTEIN 10
Paelopatides45623T COMPLEX PROTEIN 10
Paelopatides45624-
Paelopatides45625-
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