About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45754ZINC FINGER PROTEIN
Paelopatides45755ZINC FINGER PROTEIN
Paelopatides45756-
Paelopatides45757-
Paelopatides45758-
Paelopatides45759WINGED HELIX DOMAIN-CONTAINING PROTEIN
Paelopatides45760-
Paelopatides45761WD REPEAT-CONTAINING PROTEIN 55
Paelopatides45762PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides45763BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides45764-
Paelopatides45765-
Paelopatides45766RE74312P
Paelopatides45767SEC24-RELATED PROTEIN
Paelopatides45768SEC24-RELATED PROTEIN
Paelopatides45769FIBRONECTIN TYPE 3 AND ANKYRIN REPEAT DOMAINS PROTEIN 1
Paelopatides45770CARBONYL REDUCTASE 1-RELATED
Paelopatides45771LEUCOKININ RECEPTOR-RELATED
Paelopatides45772LONG-CHAIN-FATTY-ACID--COA LIGASE
Paelopatides45773LONG-CHAIN-FATTY-ACID--COA LIGASE
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