About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45817SACSIN
Paelopatides45818ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides45819SACSIN
Paelopatides45820ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides45821BUCENTAUR RELATED
Paelopatides45822GTP-BINDING
Paelopatides45823-
Paelopatides45824-
Paelopatides45825PROTEIN CBG26694
Paelopatides45826ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides45827MEIOSIS 1 ARREST PROTEIN
Paelopatides45828MEIOSIS 1 ARREST PROTEIN
Paelopatides45829AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
Paelopatides45830-
Paelopatides45831COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides45832ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides45833-
Paelopatides45834SKELETOR-RELATED
Paelopatides45835PROTEIN CBG26694
Paelopatides45836-
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