About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45944-
Paelopatides45945ARMADILLO-TYPE FOLD-RELATED
Paelopatides45946-
Paelopatides45947-
Paelopatides45948LEUCINE ZIPPER PROTEIN 4-RELATED
Paelopatides45949DYNAMIN
Paelopatides45950-
Paelopatides45951REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45952-
Paelopatides45953-
Paelopatides45954INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides45955ENDONUCLEASE
Paelopatides45956FI21225P1
Paelopatides45957-
Paelopatides45958POL PROTEIN
Paelopatides45959ENDONUCLEASE-RELATED
Paelopatides45960CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1
Paelopatides45961FI21225P1
Paelopatides45962AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2
Paelopatides45963WINS1, 2 PROTEIN
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