About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07246-
Paelopatides07247EPM2A-INTERACTING PROTEIN 1
Paelopatides07249ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07250POL PROTEIN
Paelopatides07251-
Paelopatides07252PROTEIN CBG26694
Paelopatides07253PROTEIN CBG26694
Paelopatides07255-
Paelopatides07256FAS APOPTOTIC INHIBITORY MOLECULE FAIM
Paelopatides07257-
Paelopatides07258FIBRILLIN-RELATED
Paelopatides07259NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides07260REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07261LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73
Paelopatides07262-
Paelopatides07263MULTIPLE PDZ DOMAIN PROTEIN
Paelopatides07264-
Paelopatides07265PROTEIN, PUTATIVE-RELATED
Paelopatides07266RETROTRANSPOSON
Paelopatides07267SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
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