About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07311FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07312FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07313PROTEIN CBG26694
Paelopatides07314-
Paelopatides07315-
Paelopatides07316-
Paelopatides07317REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07318RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides07319-
Paelopatides07320DNA-DIRECTED RNA POLYMERASE
Paelopatides07321PROTEIN CBG26694
Paelopatides07322VIRAL IAP-ASSOCIATED FACTOR HOMOLOG
Paelopatides07323-
Paelopatides07324ATPASE E1
Paelopatides07325URIDINE PHOSPHORYLASE
Paelopatides07326RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN
Paelopatides07327N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides07328GAG-RELATED PROTEIN
Paelopatides07329DI-N-ACETYLCHITOBIASE
Paelopatides07330-
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