About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07495-
Paelopatides07496PROTEIN CBG26694
Paelopatides07497TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides07500REVERSE TRANSCRIPTASES
Paelopatides07501INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides07502SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides07503-
Paelopatides07504-
Paelopatides07505-
Paelopatides07506-
Paelopatides07507-
Paelopatides07508-
Paelopatides07509REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07510(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Paelopatides07511POL PROTEIN
Paelopatides07512PROTEIN CBG26694
Paelopatides07513ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07514EPM2A-INTERACTING PROTEIN 1
Paelopatides07515EPM2A-INTERACTING PROTEIN 1
Paelopatides07516PDZ DOMAIN CONTAINING PROTEIN
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