About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07455G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides07456PROTEIN CBG26694
Paelopatides07457ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07458CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides07459RETROTRANSPOSON
Paelopatides07460GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides07461PROTEIN MCM10 HOMOLOG
Paelopatides07462EPM2A-INTERACTING PROTEIN 1
Paelopatides07463EPM2A-INTERACTING PROTEIN 1
Paelopatides07464-
Paelopatides07465EXPRESSED PROTEIN
Paelopatides07466-
Paelopatides07467-
Paelopatides07468-
Paelopatides07469-
Paelopatides07470PF6
Paelopatides07471-
Paelopatides07472PF6
Paelopatides07473PF6
Paelopatides07474-
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