About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07475SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides07476PROTEIN CBG26694
Paelopatides07477-
Paelopatides07478-
Paelopatides07479-
Paelopatides07480TRANSPOSON
Paelopatides07481POL PROTEIN
Paelopatides07482ENDONUCLEASE-RELATED
Paelopatides07483-
Paelopatides07484-
Paelopatides07485RNA-BINDING PROTEIN RELATED
Paelopatides07486EPM2A-INTERACTING PROTEIN 1
Paelopatides07487EPM2A-INTERACTING PROTEIN 1
Paelopatides07488PROTEIN CBG26694
Paelopatides07489LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED
Paelopatides07490RETROTRANSPOSON
Paelopatides07491PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides07492-
Paelopatides07493FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07494FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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