About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07394-
Paelopatides07395-
Paelopatides07396BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides07397TRANSPOSABLE ELEMENT-RELATED
Paelopatides07398TRANSPOSABLE ELEMENT-RELATED
Paelopatides07399-
Paelopatides07400HL07962P-RELATED
Paelopatides07401HL07962P-RELATED
Paelopatides07402HL07962P-RELATED
Paelopatides07403HL07962P-RELATED
Paelopatides07404P140CAP/SNIP-RELATED
Paelopatides07405REVERSE TRANSCRIPTASE
Paelopatides07406SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides07407-
Paelopatides07408CENTROSOMAL PROTEIN CEP135
Paelopatides07409THREONINE SYNTHASE FAMILY MEMBER
Paelopatides07410WD-REPEAT PROTEIN BING4
Paelopatides07411PROTEIN CBG26694
Paelopatides07412PROTEIN CBG26694
Paelopatides07413-
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