About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s046.g0176.t1CCR4-NOT TRANSCRIPTION COMPLEX
Lsat_s046.g0177.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s046.g0178.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s046.g0179.t1
Lsat_s046.g0180.t1HYPERKINETIC, ISOFORM M
Lsat_s046.g0181.t1ZINC FINGER PROTEIN
Lsat_s046.g0182.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s046.g0183.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s046.g0184.t1TRIOSEPHOSPHATE ISOMERASE
Lsat_s046.g0185.t1PSEUDOURIDYLATE SYNTHASE
Lsat_s046.g0186.t1RIBOSOMAL RNA METHYLTRANSFERASE
Lsat_s046.g0187.t1
Lsat_s046.g0188.t1PROPERDIN
Lsat_s046.g0189.t1
Lsat_s046.g0190.t1CASPASE
Lsat_s046.g0191.t1MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
Lsat_s046.g0192.t1PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
Lsat_s046.g0193.t1FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
Lsat_s046.g0194.t1BIOTIN PROTEIN LIGASE
Lsat_s046.g0195.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
Lsat_s046.g0196.t1SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED
Lsat_s046.g0197.t1
Lsat_s046.g0198.t1PROPERDIN
Lsat_s046.g0199.t1
Lsat_s046.g0200.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s046.g0201.t1
Lsat_s046.g0202.t1
Lsat_s046.g0203.t1
Lsat_s046.g0204.t1
Lsat_s046.g0205.t1UNCHARACTERIZED
Lsat_s046.g0206.t1
Lsat_s046.g0207.t1
Lsat_s046.g0208.t1
Lsat_s046.g0209.t1
Lsat_s046.g0210.t1
Lsat_s046.g0211.t1
Lsat_s046.g0212.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s046.g0213.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s046.g0214.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s046.g0215.t1-
Lsat_s046.g0216.t1GUANYLYL CYCLASE
Lsat_s046.g0217.t1
Lsat_s046.g0218.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s046.g0219.t1
Lsat_s046.g0220.t1
Lsat_s046.g0221.t1
Lsat_s046.g0222.t1
Lsat_s046.g0223.t1
Lsat_s046.g0224.t1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Lsat_s046.g0225.t1
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