About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08455GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides08456PROTEIN CBG26694
Paelopatides08457PROTEIN CBG26694
Paelopatides08458HOMEOBOX PROTEIN
Paelopatides08459-
Paelopatides08460ENZYMATIC POLYPROTEIN-RELATED
Paelopatides08461PROTEIN CBG26694
Paelopatides08462-
Paelopatides08463-
Paelopatides08464CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides08466REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08468RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides08495PROTEIN CBG26694
Paelopatides08496-
Paelopatides08497-
Paelopatides08498-
Paelopatides08499-
Paelopatides08500SI:CH211-196P9.1-RELATED
Paelopatides08501BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides08502-
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